euGenes/Arthropods About Arthropods EvidentialGene DroSpeGe

Index of /EvidentialGene/arthropods/pogonusbeetle

      Name                    Last modified       Size  

[DIR] Parent Directory 14-Mar-2021 16:09 - [DIR] pogonus1eg6/ 30-Jun-2015 22:13 -

mRNA Transcript assemblies for Pogonus beetle
organism=Pogonus chalceus
version 1 (2013 jun)
Don Gilbert, gilbertd near indiana edu

Bioproject=PRJNA201485: EvidentialGene: Pogonus chalceus mRNA Transcriptome Re-assembly and Annotation (Tax ID: 235516)

This is a 'reference-free' gene set assembly from mRNA-seq, without reference made to
a genome assembly nor training/mapping from other species genes. As such it has different 
values than genome-based gene sets, one important one is no external artifacts or errors 
contribute to these genes.  Any protein orthology measured has not been influenced by 
gene modelling using other species (with their artifacts), and genome assembly errors.

Developed at the Genome Informatics Lab of Indiana University Biology Department