euGenes/Arthropods About Arthropods EvidentialGene DroSpeGe

Index of /EvidentialGene/daphnia/daphnia_pulex/daphnia_pulex_genes2017/introns

      Name                           Last modified       Size  

[DIR] Parent Directory 27-Nov-2017 23:01 - [TXT] daphplx17_rnaintrons_all.gff 22-Mar-2017 22:46 20.7M [TXT] daphplx17_rnaintrons_valid.gff 29-Mar-2017 23:26 10.0M

Intron locations extracted from mapping RNA-seq to chr assembly daphplx16chr,
using GSNAP.  RNA-seq data sets are listed in rnas/rnasource/  
rnaintrons_valid are validated by number of RNA reads splice-mapped to the
same intron location.  _all includes the greater number with rare locations.

Developed at the Genome Informatics Lab of Indiana University Biology Department