euGenes/Arthropods About Arthropods EvidentialGene DroSpeGe

About euGenes/EvidentialGene

EvidentialGene is a genome informatics project for "Evidence Directed Gene Construction for Eukaryotes", for constructing high quality, accurate gene sets for animals and plants (any eukaryotes), being developed by Don Gilbert at Indiana University, gilbertd at indiana edu.

Construction refers to the combination of classical gene prediction, and more recent gene assembly (de-novo and genome-assisted) methods. The basic Evigene methods involve using available best-of-breed gene prediction and assembly software, combining all evidence for genes, from expressed sequences, genome assembly sequences, related species protein sequences, and any other, to annotate and score gene constructions. Over-produced constructions are classified by gene evidence for best qualities per "locus", including genome-aligned and gene-transcript aligned (genome-free) locus identification.

How to cite this work, and who else has, is in /EvidentialGene/evigene/docs/evigene-cites.txt

All software developed for EvidentialGene is publicly available for use,
The best way to get and update is: ftp
Archived older (and occasional newer prerelease) Evigene software is here:

      Name                           Last modified       Size  

[DIR] Parent Directory 12-Jan-2018 20:18 - [DIR] config/ 27-Dec-2011 12:11 - [DIR] docs/ 23-Feb-2018 20:14 - [DIR] lib/ 26-Jul-2012 14:33 - [DIR] scripts/ 31-Dec-2017 22:36 - [TXT] 30-Mar-2011 14:23 1k [TXT] 30-Mar-2011 14:18 1k [TXT] 30-Mar-2011 14:10 1k [TXT] About_EvidentialGene.html 11-Jun-2015 14:16 2k [TXT] evigene_rnaseq_denovo2012.txt 07-Jun-2012 21:29 3k [TXT] eugenes_proteome_y2k_sizes.txt 03-Dec-2012 01:37 6k [TXT] evigene_rnaseq_2012_stats.txt 06-Dec-2012 12:00 9k [TXT] EviGene-results-summary.txt 08-Jun-2011 11:42 10k

Developed at the Genome Informatics Lab of Indiana University Biology Department