Index of /EvidentialGene/nasonia/genbanksubmit

 Name                        Last modified       Size  

 Parent Directory            25-Mar-2019 14:24      -  
 evigene_genbanksubmit.txt   01-Feb-2012 20:54     1k  
 evigene_wasp2_gbsubmit.conf 16-Jan-2012 17:26    10k  
 gbsub.discrep               01-Feb-2012 16:36   6.7M  
 gbsub.valsum                01-Feb-2012 16:49     2k  
 log.evg2tbl11utb            01-Feb-2012 16:27   1.4M  
 pub11u.all.fsa.gz           01-Feb-2012 16:27  87.1M  
 pub11u.all.gbf.gz           01-Feb-2012 16:35   126M  
 pub11u.all.pep.gz           01-Feb-2012 16:27   6.1M  
 pub11u.all.pep.report.gz    01-Feb-2012 16:31    84k  
 pub11u.all.sqn.gz           01-Feb-2012 16:32   101M  
 pub11u.all.tbl.gz           01-Feb-2012 16:27   4.6M  
 pub11u.all.val.gz           01-Feb-2012 16:36  1011k  
 pub11u.sbt                  01-Feb-2012 16:27     1k  

EvidentialGene GenbankSubmit methods
====================================
Convert Evigene GFF to Genbank genome annotation submit format

$evigene/scripts/evigene2genbanktbl.pl -debug  -conf genes/evigene_wasp2_gbsubmit.conf \
 -in genes/pub11u/pub11u.good.gff  -out submit/pub11u.tbl > & submit/log.evg2tbl9 &

evigene_wasp2_gbsubmit.conf :
  configure genbank submit output, per feature type, options, evidence cutoffs

$ncbibin/tbl2asn -p submit/ -a s -V vb -X E -Z submit/gbsub.discrep -n 'Nasonia vitripennis' -C Nasvi  \
  > & submit/log.tbl &

submit files
 6.7M  gbsub.discrep     Discrepancy report
 1.6K  gbsub.valsum      validation summary
 1.4M  log.evg2tbl11utb     evigene2genbank log
  87M  pub11u.all.fsa.gz    tbl2asn genome sequence
 126M  pub11u.all.gbf.gz    tbl2asn genbank format
 6.1M  pub11u.all.pep.gz    evigene2genbank peptides
  84K  pub11u.all.pep.report.gz   peptide report
 101M  pub11u.all.sqn.gz    tbl2asn
 4.6M  pub11u.all.tbl.gz    evigene2genbank table
 1.0M  pub11u.all.val.gz    validation report
 776B  pub11u.sbt           submit header