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Index of /EvidentialGene/other/sra2genes_testdrive/sra2genes4v_testdrive

      Name                                     Last modified       Size  

[DIR] Parent Directory 16-May-2020 23:32 - [   ] evigene20may20.tar 20-May-2020 22:37 9.0M [TXT] evigene_apps_linux_x86_64_19may14.list 13-May-2019 15:10 1k [   ] evigene_apps_linux_x86_64_19may14.tar.gz 13-May-2019 15:03 548M [   ] run_evgsra2genes4v.sh 07-Mar-2020 20:42 3k [TXT] run_plant1kYYPE.txt 17-Mar-2020 15:41 5k [TXT] run_plantATtest.txt 17-Mar-2020 14:48 1k [TXT] sra2genes4v_about.txt 17-Mar-2020 15:44 7k [DIR] sra2genes_start7test/ 18-Mar-2020 20:41 - [TXT] sra2geneswebdir.html 16-Jul-2019 19:14 7k [TXT] trasm_1kplants_nat19_SraRunInfo.csv 09-Nov-2019 21:14 567k [TXT] trasm_1kplants_nat19_info.txt 09-Nov-2019 20:25 1k [TXT] trasm_1kplants_nat19st1clean.tab 09-Nov-2019 20:25 208k


 SRA2Genes Test Drive, 2020-March
 for updated EvidentialGene software (20mar15, a.k.a. version 4)
 
 run_plant1kYYPE.txt : full example for 1000-Plants RNA-seq data (steps 1..10)
 run_plantATtest.txt : simplest example for Arabidopsis transcripts (steps 7..10)
 evigene20may20.tar  : Evigene source code and documents tar file (extract with 'tar -xf evigene20may20.tar' to use) 
 sra2genes_start7test: starting data needed for run_plantATtest, and also for 
      run_plant1kYYPE, though that fetches RNA-Seq from NCBI SRA 

 Not yet updated: the evigene_apps tar file of all Evigene component programs needed by SRA2Genes,
 but see prior  evigene_apps_linux_x86_64_19may14.tar.gz which has all, or most.




Developed at the Genome Informatics Lab of Indiana University Biology Department