# Assembly name: Ler Assembly # Organism name: Arabidopsis thaliana (thale cress) # Infraspecific name: ecotype=Landsberg erecta # Taxid: 3702 # BioSample: SAMN04457953 # BioProject: PRJNA311266 # Submitter: Center for genomic Regulation # Date: 2016-5-27 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: LUHQ01 # Assembly method: AllPaths v. r40912; SSPACE-SR v. 1.4; SSPACE-LR v. 1.1; PBJelly v. 15.2.20 # Genome coverage: 141.0x # Sequencing technology: Illumina; PacBio # GenBank assembly accession: GCA_001651475.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_001651485.1 Primary Assembly ## GCA_001651495.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name chr1 assembled-molecule 1 Chromosome CM004359.1 <> na Primary Assembly 29387870 na chr2 assembled-molecule 2 Chromosome CM004360.1 <> na Primary Assembly 19037554 na chr3 assembled-molecule 3 Chromosome CM004361.1 <> na Primary Assembly 22588203 na chr4 assembled-molecule 4 Chromosome CM004362.1 <> na Primary Assembly 17980856 na chr5 assembled-molecule 5 Chromosome CM004363.1 <> na Primary Assembly 26372590 na scaffold15_Contig142 unplaced-scaffold na na LUHQ01000006.1 <> na Primary Assembly 235832 na scaffold15_Contig624 unplaced-scaffold na na LUHQ01000007.1 <> na Primary Assembly 89368 na scaffold18_size294915 unplaced-scaffold na na LUHQ01000008.1 <> na Primary Assembly 294915 na scaffold24_size307384 unplaced-scaffold na na LUHQ01000009.1 <> na Primary Assembly 307384 na scaffold26_size238942 unplaced-scaffold na na LUHQ01000010.1 <> na Primary Assembly 238942 na scaffold27_size282142 unplaced-scaffold na na LUHQ01000011.1 <> na Primary Assembly 282142 na scaffold29_size187832 unplaced-scaffold na na LUHQ01000012.1 <> na Primary Assembly 187832 na scaffold32_size196412 unplaced-scaffold na na LUHQ01000013.1 <> na Primary Assembly 196412 na scaffold35_size131485 unplaced-scaffold na na LUHQ01000014.1 <> na Primary Assembly 131485 na scaffold37_size112703 unplaced-scaffold na na LUHQ01000016.1 <> na Primary Assembly 112703 na scaffold38_size104578 unplaced-scaffold na na LUHQ01000017.1 <> na Primary Assembly 104578 na scaffold39_size130710 unplaced-scaffold na na LUHQ01000018.1 <> na Primary Assembly 130710 na scaffold41_size78703 unplaced-scaffold na na LUHQ01000020.1 <> na Primary Assembly 78703 na scaffold44_size66369 unplaced-scaffold na na LUHQ01000022.1 <> na Primary Assembly 66369 na scaffold46_size62883 unplaced-scaffold na na LUHQ01000023.1 <> na Primary Assembly 62883 na scaffold48_size56796 unplaced-scaffold na na LUHQ01000024.1 <> na Primary Assembly 56796 na scaffold49_size55398 unplaced-scaffold na na LUHQ01000025.1 <> na Primary Assembly 55398 na scaffold50_size53549 unplaced-scaffold na na LUHQ01000026.1 <> na Primary Assembly 53549 na scaffold52_size52344 unplaced-scaffold na na LUHQ01000027.1 <> na Primary Assembly 52344 na scaffold55_size51175 unplaced-scaffold na na LUHQ01000028.1 <> na Primary Assembly 51175 na scaffold68_size61837 unplaced-scaffold na na LUHQ01000029.1 <> na Primary Assembly 61837 na scaffold81_size50669 unplaced-scaffold na na LUHQ01000030.1 <> na Primary Assembly 50669 na scaffold40_size268640 unlocalized-scaffold MT Mitochondrion LUHQ01000019.1 <> na non-nuclear 268640 na scaffold43_size213235 unlocalized-scaffold MT Mitochondrion LUHQ01000021.1 <> na non-nuclear 213235 na scaffold36_size139747 unlocalized-scaffold Pltd Chloroplast LUHQ01000015.1 <> na non-nuclear 139747 na