euGenes/Arthropods About EvidentialGene BLAST Gene Search Maps Data DroSpeGe
euGenes Arthropod genomes

euGenes/ Arthropod genomes
orthologous gene groups, genome and genomics summaries

Phylogeny of species with sequenced genomes in Phylum Arthropoda
    Draft plans for arthropod non-insect-centric orthology gene set, 2012
    EvidentialGene : evidence-based gene finding for arthropods and other eukaryotes, 2011.

    Current Bionet ARTHROPOD News
ARTHROPOD GENOMICS SYMPOSIUM, June 9-12, 2011, in Kansas City, Doris Merrill, Thu Sep 16 2010
question about DroSpeGe, Don Gilbert, Thu Sep 9 2010
question about DroSpeGe, jyang29, Wed Sep 8 2010
Ant genomes paper is public, Don Gilbert, Wed Sep 1 2010

Search Arthropod gene clusters
ARP1: (2008.08)   ...   ARP2: (2009.12)

for:  

>Limit to genes in these taxa
Mosquitoes
Fruitflies
Hymenoptera
Other insects
Other Ar'pods
>Limit to genes in these species
Current species list:
Crustacean: Daphnia pulex (waterflea)
Arachnid: Ixodes scapularis (tick)
Insects: Acyrthosiphon pisum (pea aphid), Pediculus (body louse),
   Aedes, Anopheles, Culex (mosquitoes), Bombyx (silk worm)
   Apis (honeybee), Nasonia (jewel wasp), Tribolium (flour beetle)
   Drosophila (3 fruitflies: Dmel, Dpse, Dmoj)

Summaries of Arthropod genomes
BLAST search genes
Ortholog clustering of genes
Data for analyses
GBrowse genome maps

Updated January 2010 (ARP2). Established August 2008.
If you find this service useful, or would like improvements, please let me know. -- Don Gilbert, gilbertd At indiana edu

      Name                    Last modified       Size  Description

[DIR] Parent Directory 18-Jun-2014 13:25 - [DIR] about/ 06-Mar-2012 00:10 - [DIR] blast/ 16-Jul-2011 16:37 - [DIR] data/ 06-Sep-2011 15:16 - [DIR] genepages/ 26-Jul-2011 13:35 - [DIR] maps/ 16-Jul-2011 16:37 - [DIR] orthologs/ 22-Feb-2012 14:00 - [DIR] summaries/ 05-Dec-2009 19:44 -


Citations:  
  D. Gilbert, OrthoMCL clustering among 14 arthropod proteomes (ARP2).
  http://arthropods.eugenes.org/arthropods/
  Dec. 2009, gilbertd@indiana.edu

  D. Gilbert, OrthoMCL clustering among 13 arthropod proteomes (ARP1).
  http://insects.eugenes.org/arthropods/
  Aug. 2008, gilbertd@indiana.edu

  OrthoMCL: http://www.orthomcl.org/
   Li Li, Christian J. Stoeckert, Jr., and David S. Roos
   OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes. Genome Res. 2003 13: 2178-2189. 
   Feng Chen, Aaron J. Mackey, Jeroen K. Vermunt, and David S. Roos
   Assessing Performance of Orthology Detection Strategies Applied to Eukaryotic Genomes. PLoS ONE 2007 2(4): e383.



Developed at the Genome Informatics Lab of Indiana University Biology Department