euGenes/ Arthropod genomes
orthologous gene groups, genome and genomics summaries

EvidentialGene : evidence-based gene finding for arthropods and other eukaryotes, 2011.     Current Bionet ARTHROPOD News ARTHROPOD GENOMICS SYMPOSIUM, June 9-12, 2011, in Kansas City, Doris Merrill, Thu Sep 16 2010 question about DroSpeGe, Don Gilbert, Thu Sep 9 2010 question about DroSpeGe, jyang29, Wed Sep 8 2010 Ant genomes paper is public, Don Gilbert, Wed Sep 1 2010

Search Arthropod gene clusters ARP1: (2008.08)   ...   ARP2: (2009.12) for:   >Limit to genes in these taxa Mosquitoes any None 1 1+ 2+ Fruitflies any None 1 1+ 2+ Hymenoptera any None 1 1+ 2+ Other insects any None 1 1+ 2+ Other Ar'pods any None 1 1+ 2+ >Limit to genes in these species Aedes any None 1 1+ 2+ Anopheles any None 1 1+ 2+ Culex any None 1 1+ 2+ DrosMel any None 1 1+ 2+ DrosMoj any None 1 1+ 2+ DrosPse any None 1 1+ 2+ Apis any None 1 1+ 2+ Nasonia any None 1 1+ 2+ Bombyx any None 1 1+ 2+ Tribolium any None 1 1+ 2+ Aphid any None 1 1+ 2+ Pediculus any None 1 1+ 2+ Daphnia any None 1 1+ 2+ Ixodes any None 1 1+ 2+ Current species list: Crustacean: Daphnia pulex (waterflea) Arachnid: Ixodes scapularis (tick) Insects: Acyrthosiphon pisum (pea aphid), Pediculus (body louse),    Aedes, Anopheles, Culex (mosquitoes), Bombyx (silk worm)    Apis (honeybee), Nasonia (jewel wasp), Tribolium (flour beetle)    Drosophila (3 fruitflies: Dmel, Dpse, Dmoj) Summaries of Arthropod genomes BLAST search genes Ortholog clustering of genes Data for analyses GBrowse genome maps

Updated January 2010 (ARP2). Established August 2008.
If you find this service useful, or would like improvements, please let me know. -- Don Gilbert, gilbertd At indiana edu

 Name                    Last modified       Size  Description

 Parent Directory        24-Jul-2011 21:52      -  
 about/                  24-Jul-2011 23:02      -  
 blast/                  16-Jul-2011 16:37      -  
 data/                   06-Sep-2011 15:16      -  
 genepages/              26-Jul-2011 13:35      -  
 maps/                   16-Jul-2011 16:37      -  
 orthologs/              26-Jul-2011 15:10      -  
 summaries/              05-Dec-2009 19:44      -  

Citations:  
  D. Gilbert, OrthoMCL clustering among 14 arthropod proteomes (ARP2).
  http://arthropods.eugenes.org/arthropods/
  Dec. 2009, gilbertd@indiana.edu

  D. Gilbert, OrthoMCL clustering among 13 arthropod proteomes (ARP1).
  http://insects.eugenes.org/arthropods/
  Aug. 2008, gilbertd@indiana.edu

  OrthoMCL: http://www.orthomcl.org/
   Li Li, Christian J. Stoeckert, Jr., and David S. Roos
   OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes. Genome Res. 2003 13: 2178-2189. 
   Feng Chen, Aaron J. Mackey, Jeroen K. Vermunt, and David S. Roos
   Assessing Performance of Orthology Detection Strategies Applied to Eukaryotic Genomes. PLoS ONE 2007 2(4): e383.