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EvidentialGene: Daphnia_Insect_Fish Orthology Gene Groups

Search Daphnia_Insect_Fish Orthology Gene Groups

Search Daphnia Clade Gene Families
DAPH10: (2017) ... ARP7: (2014) ..


>Limit to genes in these taxa
>Limit to genes in these species
Daphnia magna Daphnia pulex Daphnia galeata Daphnia simoides
Drosophila mel White fly Tribolium Beetle
Guppy fish Zebra fish Human
      Name                       Last modified       Size  Description

[DIR] Parent Directory 27-Nov-2017 23:01 - [TXT] EvigeneOrthoMCLMethods.txt 29-Nov-2017 15:22 2k [DIR] daph10_aaset/ 29-Nov-2017 15:18 - [DIR] daph10_omcl/ 29-Nov-2017 15:17 - [TXT] daph10omcla.species.txt 29-Nov-2017 14:53 1k [TXT] orthologsearch.html 29-Nov-2017 15:47 9k

daph10_omcl/ contains the orthology analysis of daphplx17evigenes, with 9 other
species proteins,  including 3 other Daphnia, 3 insects, and 2 fish + human.
The orthology analysis is done with Evigene methods, based on reciprocal best BLASTP
and OrthoMCL clustering of blastp results to gene groups.

daph10_aaset/ contains the gene proteins used in above orthology analysis.

Developed at the Genome Informatics Lab of Indiana University Biology Department