The idtab files have corresponding ID columns as: ProteinID, OrthoGroupID, GeneID, TranscriptID

The .aa and .cds fasta files have genes with same ID (the protein ID). Several of these source files are Ensembl CDS where Transcript ID (ENS..T) was replaced with Protein ID (ENS..P). Sequences include only the primary transcript form. Names files are the name taken from sequence or associated annotation.

The following are sourced from Ensembl release 74 (pep.all.fa and cds.all.fa) ,
astymex = Astyanax_mexicanus.AstMex102 ; zebrafish = Danio_rerio.Zv9 ; stickleback = Gasterosteus_aculeatus.BROADS1 ; spotgar = Lepisosteus_oculatus.LepOcu1 ; tilapia = Oreochromis_niloticus.Orenil1.0 ; medaka = Oryzias_latipes.MEDAKA1 ; tetraodon = Tetraodon_nigroviridis.TETRAODON8 ; platyfish = Xiphophorus_maculatus.Xipmac4.4.2 ;

mayzebr is from NCBI genomes/Maylandia_zebra/ protein and rna genbank releases. Catfish is Evigene mRNA assembly from EvidentialGene/vertebrates/catfish/ Killifish is from this project (Evigene genome-genes + mRNA-assembly)

 Name                        Last modified       Size  Description

 Parent Directory            04-Jul-2015 14:05      -  
 fish12.astymex.aa.gz        22-Mar-2014 15:22   8.2M  
 fish12.astymex.cds.gz       22-Mar-2014 17:36  13.5M  
 fish12.astymex.idtab        22-Mar-2014 17:05   1.7M  
 fish12.astymex.names.gz     23-Mar-2014 02:13   318k  
 fish12.catfish.aa.gz        22-Mar-2014 15:22  10.7M  
 fish12.catfish.cds.gz       23-Mar-2014 00:04  16.9M  
 fish12.catfish.idtab        23-Mar-2014 02:02   3.0M  
 fish12.human.aa.gz          22-Mar-2014 15:22  10.5M  
 fish12.human.idtab          22-Mar-2014 17:23   1.6M  
 fish12.human.names.gz       23-Mar-2014 02:13   856k  
 fish12.kfish2.aa.gz         22-Mar-2014 15:22  13.3M  
 fish12.kfish2.cds.gz        23-Mar-2014 01:58  21.5M  
 fish12.kfish2.idtab         23-Mar-2014 02:02   2.4M  
 fish12.kfish2.names.gz      23-Mar-2014 02:13   1.0M  
 fish12.mayzebr.aa.gz        22-Mar-2014 15:22   8.9M  
 fish12.mayzebr.cds.gz       23-Mar-2014 01:52  16.1M  
 fish12.mayzebr.idtab        23-Mar-2014 01:50   1.4M  
 fish12.mayzebr.names.gz     23-Mar-2014 02:13   499k  
 fish12.medaka.aa.gz         22-Mar-2014 15:22   6.6M  
 fish12.medaka.cds.gz        22-Mar-2014 17:43  10.9M  
 fish12.medaka.idtab         22-Mar-2014 17:23   1.5M  
 fish12.medaka.names.gz      23-Mar-2014 02:13   270k  
 fish12.platyfish.aa.gz      22-Mar-2014 15:22   7.5M  
 fish12.platyfish.cds.gz     22-Mar-2014 17:43  12.4M  
 fish12.platyfish.idtab      22-Mar-2014 17:23   1.5M  
 fish12.platyfish.names.gz   23-Mar-2014 02:13   264k  
 fish12.spotgar3.aa.gz       22-Mar-2014 15:22   6.9M  
 fish12.spotgar3.cds.gz      22-Mar-2014 17:43  11.3M  
 fish12.spotgar3.idtab       22-Mar-2014 17:23   1.4M  
 fish12.spotgar3.names.gz    23-Mar-2014 02:13   256k  
 fish12.stickleback.aa.gz    22-Mar-2014 15:22   7.0M  
 fish12.stickleback.cds.gz   22-Mar-2014 17:43  11.7M  
 fish12.stickleback.idtab    22-Mar-2014 17:23   1.5M  
 fish12.stickleback.names.gz 23-Mar-2014 02:13   295k  
 fish12.tetraodon.aa.gz      22-Mar-2014 15:22   6.7M  
 fish12.tetraodon.cds.gz     22-Mar-2014 17:43  11.0M  
 fish12.tetraodon.idtab      22-Mar-2014 17:23   1.4M  
 fish12.tetraodon.names.gz   23-Mar-2014 02:13   298k  
 fish12.tilapia.aa.gz        22-Mar-2014 15:22   8.0M  
 fish12.tilapia.cds.gz       22-Mar-2014 17:43  13.4M  
 fish12.tilapia.idtab        22-Mar-2014 17:23   1.6M  
 fish12.tilapia.names.gz     23-Mar-2014 02:13   289k  
 fish12.zebrafish.aa.gz      22-Mar-2014 15:22   9.6M  
 fish12.zebrafish.cds.gz     22-Mar-2014 17:43  15.7M  
 fish12.zebrafish.idtab      22-Mar-2014 17:23   1.9M  
 fish12.zebrafish.names.gz   23-Mar-2014 02:13   429k