Readme
Choose Species genomes, genome Data type, and Blast Program:
Species genomes:
Drosophila_melanogaster [C,G,P]
.. Drosophila_yakuba [S]
Drosophila_simulans [S]
.. Drosophila_sechellia [-]
Drosophila_ananassae [S]
.. Drosophila_erecta [-]
Drosophila_pseudoobscura [C,G,P]
.. Drosophila_persimilis [-]
Drosophila_mojavensis [S]
.. Drosophila_willistoni [-]
Drosophila_virilis [S]
.. Drosophila_grimshawi [-]
Data type key:
C = chromosomes;
S = preliminalry assembly scaffold NT;
G = predicted genes;
P = predicted proteins;
- = no data yet
Data type
Program
Enter sequence below in FASTA format
Or load it from disk
The query sequence is
filtered
for low complexity regions by default.
Filter
Low complexity
Mask for lookup table only
Expect
Matrix
Perform ungapped alignment
Query Genetic Codes (blastx only)
Frame shift penalty for blastx
Other advanced options:
Graphical Overview
Alignment view
Descriptions
Alignments
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